PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN06372.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 385aa    MW: 43601.6 Da    PI: 5.5136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN06372.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-13181232155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  KHN06372.1 181 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 232
                 79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.43E-13179236No hitNo description
SuperFamilySSF474598.11E-17180247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.751180231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-13181246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-10181232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10186237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MERLQGPLNS CFFGDPLEVN CLDQVLVDEE SLRLEEEEQF LISSLEDNMP FLQMLQSVES  60
PQFFPLKEPN FQTLLRLQHM KKPWEGIAYI PRMEAQVQAA LELESCVTHD MLEMQSPVKS  120
ESNELQHPLS ISCFEKVNYE CNQEPQKVSQ TCPKSQPTAT KERRKRKRTR PSKNKEDVEN  180
QRMTHIAVER NRRRQMNDHL SVLRSLMPPS YIQRGDQASI IGGAIDFVKE LEQLLQSLEA  240
QKRMRKNEEG GGGSSSSSTM LCKPPPPSSL SSPHGYGMRS STSDEVNCGD EVKAENKSEA  300
ADIKVTLIQT HVNLKIECQR RPGQLLKVIV ALEDLRLTIL HLNITSSETS VLYSLNLKIE  360
EDCKLCSASD IAEAVHQIFS FINGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162167RRKRKR
2181192RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2352930.0AC235293.1 Glycine max strain Williams 82 clone GM_WBb0059D15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528761.10.0PREDICTED: transcription factor bHLH57
TrEMBLA0A0B2PFM90.0A0A0B2PFM9_GLYSO; Transcription factor bHLH70
STRINGGLYMA07G05500.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.14e-67bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]